Dr. Jan Brocher

Scientific Image Processing and Analysis

08.07.2015, 09.00 - 17.00
09.07.2015, 09.00 - 17.00
Haus zur Rosen (Auditorium)
Anmeldung möglich bis: 31.12.2015
ECTS
1.0
en
30 €

This two-day course on processing and analysis of digital images according to high scientific standards covers:

  • Basics in microscopy, good image acquisition, resolution and sampling
  • Batch processing, automation (using macros), 3D reconstruction
  • Reducing noise, background, and the use of image filters
  • ƒƒImportance and practical use of different color modes (color spaces)
  • Correct resizing, contrast improvement and labeling
  • Feature extraction, segmentation and thresholding
  • Automatic object counting, tracking and tracing (2D and 3D)
  • Measurements and quantifications of fluorescence intensities (and western blots)
  • Preparing figures for scientific presentations, posters and publications.

The workshop has a focus on life science applications and microscopic images. We will use the professional software ImageJ / Fiji for processing and analysis.

Die Anmeldefrist für diesen Kurs ist abgelaufen.